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Home > Extras > Bioinformatics For Dummies® Bonus Material
Bioinformatics For Dummies® Bonus Material
By: Jean-Michel Claverie Ph.D., Cedric Notredame Ph.D.
 

[Bio FD Home][Ch.1][Ch.2][Ch.3][Ch.4][Ch.5][Ch.6][Ch.7][Ch.8][Ch.9][Ch.10][Ch.11][Ch.12][Ch.13][Ch.15]

Chapter 7: Similarity Searches on Sequence Databases

Chapter 7 images

A few BLAST and PSI-BLAST servers around the world

Country or Continent Program URL
USA BLAST/PSI-BLAST www.ncbi.nlm.nih.gov/BLAST
Europe BLAST www.ch.embnet.org/software/bBLAST.html
Europe BLAST www.ebi.ac.uk/blast2
Japan BLAST/PSI-BLAST www.ddbj.nig.ac.jp/E-mail/homology.html

Alternative methods for homology searches

Country or Continent Program URL
USA FASTA fasta.bioch.Virginia.edu/fasta
USA BLAT genome.ucsc.edu
Europe FASTA www.ebi.ac.uk/fasta33
Europe SSEARCH www.ch.embnet.org/software/GMFDF_form.html
Japan SSEARCH/FASTA www.ddbj.nig.ac.jp/E-mail/homology.html

 
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